BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E05LP1|AL428915
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1685 0.0
>3x_Contig1741
Length = 21706
Score = 1685 bits (848), Expect = 0.0
Identities = 854/858 (99%)
Strand = Plus / Minus
Query: 1 catcgagcctcgcacagaggacactgttagawtaatagcgttattgaaccgatctctgtc 60
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 6934 catcgagcctcgcacagaggacactgtgagaataatagcgttattgaaccgatctctgtc 6875
Query: 61 ggcgatatcgcactggtcattacaagcacaactatcccactgggaaaacagaaaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6874 ggcgatatcgcactggtcattacaagcacaactatcccactgggaaaacagaaaggaaaa 6815
Query: 121 ggatgaacgttttgcagttgaaaagaatctagtgaagaaagaagctgaatattttaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6814 ggatgaacgttttgcagttgaaaagaatctagtgaagaaagaagctgaatattttaagaa 6755
Query: 181 taaacttcttgaaagtgaaaaattacaaaagcaaacgcaatcccaattagatttatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6754 taaacttcttgaaagtgaaaaattacaaaagcaaacgcaatcccaattagatttatcttc 6695
Query: 241 cgaaacatctaaattggtcagcagcgctccaataacaggtggtagccctgccacagaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6694 cgaaacatctaaattggtcagcagcgctccaataacaggtggtagccctgccacagaggc 6635
Query: 301 aaccctactaagtccaagacgagtggtgaaacaacggaaaatagcatccccacgtcgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6634 aaccctactaagtccaagacgagtggtgaaacaacggaaaatagcatccccacgtcgtaa 6575
Query: 361 caacactcgcgctcatacaccagtctccactctcaagcttgtygagaacaccaaaccaca 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6574 caacactcgcgctcatacaccagtctccactctcaagcttgtcgagaacaccaaaccaca 6515
Query: 421 tcytaggttaaagagaaatttaaacgatcagacaaaccaagatctaataagagtctttca 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6514 tcctaggttaaagagaaatttaaacgatcagacaaaccaagatctaataagagtctttca 6455
Query: 481 tttggagaaaggaagatagcatcatcccaaaattaataaaaggtaaaagcaaaaaagcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6454 tttggagaaaggaagatagcatcatcccaaaattaataaaaggtaaaagcaaaaaagcat 6395
Query: 541 cttcatactgtatcattatttttttgttcttcattcaaccattgtatttttatttatatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6394 cttcatactgtatcattatttttttgttcttcattcaaccattgtatttttatttatatc 6335
Query: 601 gtgtctcattgaaatagacagtcggacttctaatcaaattgctaacaatatatcaggcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6334 gtgtctcattgaaatagacagtcggacttctaatcaaattgctaacaatatatcaggcat 6275
Query: 661 aatctgtggaatgaaactcacttatttggacaatggacaatagaccccttttgaaactcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6274 aatctgtggaatgaaactcacttatttggacaatggacaatagaccccttttgaaactcg 6215
Query: 721 gtgttttctgattcatatcccctcatgaacatctttcatctgaaataatatgttggtacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6214 gtgttttctgattcatatcccctcatgaacatctttcatctgaaataatatgttggtacc 6155
Query: 781 attatgactttcctctcacaataagctattcgcccattatgcaacgggtttaaccttaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6154 attatgactttcctctcacaataagctattcgcccattatgcaacgggtttaaccttaat 6095
Query: 841 cctgtttaattaaagacg 858
||||||||||||||||||
Sbjct: 6094 cctgtttaattaaagacg 6077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7319
Number of Sequences: 1807
Number of extensions: 7319
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)